STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APODApolipoprotein D. (189 aa)    
Predicted Functional Partners:
ENSAOWP00000000978
annotation not available
   
 
 0.601
TTR
Transthyretin.
    
 0.579
APOB
Apolipoprotein B.
   
  
 0.522
C8G
Complement C8 gamma chain.
     
 0.462
LCAT
Lecithin-cholesterol acyltransferase.
   
  
 0.454
ENSAOWP00000010723
annotation not available
    
 0.442
APOA4
Apolipoprotein A4.
      
 0.441
ENSAOWP00000008968
annotation not available
   
  
 0.416
SAMM50
SAMM50 sorting and assembly machinery component.
      
 0.405
APOH
Apolipoprotein H.
   
  
 0.400
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.