STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAPBVAMP associated protein B and C. (236 aa)    
Predicted Functional Partners:
STARD3
StAR related lipid transfer domain containing 3.
    
 0.971
VAPA
VAMP associated protein A.
  
0.957
ATF6
Activating transcription factor 6.
     
 0.908
STARD3NL
STARD3 N-terminal like.
    
 0.793
OSBP
Oxysterol binding protein.
    
 0.772
ENSAOWP00000020761
annotation not available
    
 0.772
OSBPL3
Oxysterol binding protein like 3.
    
 0.771
OSBPL7
Oxysterol binding protein like 7.
    
 0.771
OSBPL6
Oxysterol binding protein like 6.
    
 0.771
PITPNM1
Phosphatidylinositol transfer protein membrane associated 1.
    
 
 0.768
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.