STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH17Cadherin 17. (803 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.935
JUP
Junction plakoglobin.
    
 0.877
CTNND1
Catenin delta 1.
    
 0.817
ARVCF
ARVCF delta catenin family member.
    
 0.817
CDH5
Cadherin 5.
     
0.817
PKP4
Plakophilin 4.
    
 0.797
ENSAOWP00000023616
annotation not available
    
 0.797
CDH19
Cadherin 19.
  
  
0.784
VCL
Vinculin.
    
 0.782
ENSAOWP00000002075
annotation not available
     
0.777
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.