STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMB1Laminin subunit beta 1. (1684 aa)    
Predicted Functional Partners:
LAMA1
Laminin subunit alpha 1.
   
0.867
LAMC2
Laminin subunit gamma 2.
   
0.861
LAMA2
Laminin subunit alpha 2.
   
0.844
NTNG1
Netrin G1.
    
0.842
ENSAOWP00000008564
annotation not available
   
0.842
ENSAOWP00000008572
annotation not available
   
0.842
ENSAOWP00000025021
annotation not available
   
0.842
ITGB5
Integrin subunit beta 5.
   
 0.834
ITGAV
Integrin subunit alpha V.
    
 0.829
LAMA4
Laminin subunit alpha 4.
   
0.822
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.