STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000001311annotation not available (286 aa)    
Predicted Functional Partners:
ENSAOWP00000005894
annotation not available
    
 0.867
BYSL
Bystin like.
   
 0.759
SMAD2
SMAD family member 2.
    
 0.751
SMAD3
SMAD family member 3.
    
 0.751
TSR1
TSR1 ribosome maturation factor.
   
  0.749
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.738
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.723
RRP12
Ribosomal RNA processing 12 homolog.
   
   0.707
NOB1
NIN1 (RPN12) binding protein 1 homolog.
   
 0.684
ENSAOWP00000009534
annotation not available
    
 0.679
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.