RBM38 protein (Apteryx owenii) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

RBM38

RNA binding motif protein 38. (230 aa)

Predicted Functional Partners:

RBFOX1

0.675

RBFOX2

0.665

SF3B5

0.591

SF3B1

0.584

SF3B3

0.577

DDX42

0.565

SF3B4

0.562

ENSAOWP00000013531

0.412

Your Current Organism:

Apteryx owenii

NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX42	RBM38	ENSAOWP00000022253	ENSAOWP00000001345	DEAD-box helicase 42.	RNA binding motif protein 38.	0.565
DDX42	SF3B1	ENSAOWP00000022253	ENSAOWP00000021248	DEAD-box helicase 42.	Splicing factor 3b subunit 1.	0.999
DDX42	SF3B3	ENSAOWP00000022253	ENSAOWP00000021862	DEAD-box helicase 42.	Splicing factor 3b subunit 3.	0.997
DDX42	SF3B4	ENSAOWP00000022253	ENSAOWP00000014143	DEAD-box helicase 42.	Splicing factor 3b subunit 4.	0.991
DDX42	SF3B5	ENSAOWP00000022253	ENSAOWP00000010613	DEAD-box helicase 42.	Splicing factor 3b subunit 5.	0.982
ENSAOWP00000013531	RBFOX1	ENSAOWP00000013531	ENSAOWP00000002893	annotation not available	RNA binding fox-1 homolog 1.	0.726
ENSAOWP00000013531	RBFOX2	ENSAOWP00000013531	ENSAOWP00000023332	annotation not available	RNA binding fox-1 homolog 2.	0.705
ENSAOWP00000013531	RBM38	ENSAOWP00000013531	ENSAOWP00000001345	annotation not available	RNA binding motif protein 38.	0.412
RBFOX1	ENSAOWP00000013531	ENSAOWP00000002893	ENSAOWP00000013531	RNA binding fox-1 homolog 1.	annotation not available	0.726
RBFOX1	RBM38	ENSAOWP00000002893	ENSAOWP00000001345	RNA binding fox-1 homolog 1.	RNA binding motif protein 38.	0.675
RBFOX2	ENSAOWP00000013531	ENSAOWP00000023332	ENSAOWP00000013531	RNA binding fox-1 homolog 2.	annotation not available	0.705
RBFOX2	RBM38	ENSAOWP00000023332	ENSAOWP00000001345	RNA binding fox-1 homolog 2.	RNA binding motif protein 38.	0.665
RBM38	DDX42	ENSAOWP00000001345	ENSAOWP00000022253	RNA binding motif protein 38.	DEAD-box helicase 42.	0.565
RBM38	ENSAOWP00000013531	ENSAOWP00000001345	ENSAOWP00000013531	RNA binding motif protein 38.	annotation not available	0.412
RBM38	RBFOX1	ENSAOWP00000001345	ENSAOWP00000002893	RNA binding motif protein 38.	RNA binding fox-1 homolog 1.	0.675
RBM38	RBFOX2	ENSAOWP00000001345	ENSAOWP00000023332	RNA binding motif protein 38.	RNA binding fox-1 homolog 2.	0.665
RBM38	SF3B1	ENSAOWP00000001345	ENSAOWP00000021248	RNA binding motif protein 38.	Splicing factor 3b subunit 1.	0.584
RBM38	SF3B3	ENSAOWP00000001345	ENSAOWP00000021862	RNA binding motif protein 38.	Splicing factor 3b subunit 3.	0.577
RBM38	SF3B4	ENSAOWP00000001345	ENSAOWP00000014143	RNA binding motif protein 38.	Splicing factor 3b subunit 4.	0.562
RBM38	SF3B5	ENSAOWP00000001345	ENSAOWP00000010613	RNA binding motif protein 38.	Splicing factor 3b subunit 5.	0.591