STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAE1Ribonucleic acid export 1. (381 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
   
 0.999
NUP85
Nucleoporin 85.
   
 0.995
NUP214
Nucleoporin 214.
    
 0.993
NUP155
Nucleoporin 155.
    
 0.992
ENSAOWP00000012837
annotation not available
    
 0.992
RANBP2
RAN binding protein 2.
   
 0.992
SEH1L
SEH1 like nucleoporin.
   
 0.992
NUP93
Nucleoporin 93.
   
 0.990
TPR
Translocated promoter region, nuclear basket protein.
    
 0.989
NUP50
Nucleoporin 50.
   
 0.987
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.