LSG1 protein (Apteryx owenii) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Experiments

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[Homology]

Score

LSG1

Large 60S subunit nuclear export GTPase 1. (652 aa)

Predicted Functional Partners:

NMD3

0.995

ENSAOWP00000021457

0.988

ENSAOWP00000007259

0.987

GTPBP4

0.984

FTSJ3

0.979

RSL24D1

0.977

PES1

0.975

EBNA1BP2

0.972

SDAD1

0.970

RPL5

0.969

Your Current Organism:

Apteryx owenii

NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EBNA1BP2	ENSAOWP00000007259	ENSAOWP00000015088	ENSAOWP00000007259	EBNA1 binding protein 2.	annotation not available	0.965
EBNA1BP2	ENSAOWP00000021457	ENSAOWP00000015088	ENSAOWP00000021457	EBNA1 binding protein 2.	annotation not available	0.992
EBNA1BP2	FTSJ3	ENSAOWP00000015088	ENSAOWP00000024049	EBNA1 binding protein 2.	FtsJ RNA 2'-O-methyltransferase 3.	0.999
EBNA1BP2	GTPBP4	ENSAOWP00000015088	ENSAOWP00000009762	EBNA1 binding protein 2.	GTP binding protein 4.	0.998
EBNA1BP2	LSG1	ENSAOWP00000015088	ENSAOWP00000001398	EBNA1 binding protein 2.	Large 60S subunit nuclear export GTPase 1.	0.972
EBNA1BP2	NMD3	ENSAOWP00000015088	ENSAOWP00000022983	EBNA1 binding protein 2.	NMD3 ribosome export adaptor.	0.824
EBNA1BP2	PES1	ENSAOWP00000015088	ENSAOWP00000020665	EBNA1 binding protein 2.	Pescadillo ribosomal biogenesis factor 1.	0.999
EBNA1BP2	RPL5	ENSAOWP00000015088	ENSAOWP00000003065	EBNA1 binding protein 2.	Ribosomal protein L5.	0.419
EBNA1BP2	RSL24D1	ENSAOWP00000015088	ENSAOWP00000010861	EBNA1 binding protein 2.	Ribosomal L24 domain containing 1.	0.998
EBNA1BP2	SDAD1	ENSAOWP00000015088	ENSAOWP00000028334	EBNA1 binding protein 2.	SDA1 domain containing 1.	0.878
ENSAOWP00000007259	EBNA1BP2	ENSAOWP00000007259	ENSAOWP00000015088	annotation not available	EBNA1 binding protein 2.	0.965
ENSAOWP00000007259	ENSAOWP00000021457	ENSAOWP00000007259	ENSAOWP00000021457	annotation not available	annotation not available	0.996
ENSAOWP00000007259	FTSJ3	ENSAOWP00000007259	ENSAOWP00000024049	annotation not available	FtsJ RNA 2'-O-methyltransferase 3.	0.983
ENSAOWP00000007259	GTPBP4	ENSAOWP00000007259	ENSAOWP00000009762	annotation not available	GTP binding protein 4.	0.999
ENSAOWP00000007259	LSG1	ENSAOWP00000007259	ENSAOWP00000001398	annotation not available	Large 60S subunit nuclear export GTPase 1.	0.987
ENSAOWP00000007259	NMD3	ENSAOWP00000007259	ENSAOWP00000022983	annotation not available	NMD3 ribosome export adaptor.	0.997
ENSAOWP00000007259	PES1	ENSAOWP00000007259	ENSAOWP00000020665	annotation not available	Pescadillo ribosomal biogenesis factor 1.	0.998
ENSAOWP00000007259	RPL5	ENSAOWP00000007259	ENSAOWP00000003065	annotation not available	Ribosomal protein L5.	0.997
ENSAOWP00000007259	RSL24D1	ENSAOWP00000007259	ENSAOWP00000010861	annotation not available	Ribosomal L24 domain containing 1.	0.997
ENSAOWP00000007259	SDAD1	ENSAOWP00000007259	ENSAOWP00000028334	annotation not available	SDA1 domain containing 1.	0.984