STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A3ATPase 13A3. (1281 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
   
 
 0.713
ENSAOWP00000014432
annotation not available
    
 0.695
ATP1B4
ATPase Na+/K+ transporting family member beta 4.
    
 0.658
PLN
Phospholamban.
    
 0.649
ATP7B
ATPase copper transporting beta.
   
 0.616
ATP7A
ATPase copper transporting alpha.
   
 0.616
TMEM30A
Transmembrane protein 30A.
    
 0.576
ENSAOWP00000026221
annotation not available
    
 0.576
ATP1B1
ATPase Na+/K+ transporting subunit beta 1.
    
 0.571
ATP1B3
ATPase Na+/K+ transporting subunit beta 3.
    
 0.571
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.