STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000001452annotation not available (313 aa)    
Predicted Functional Partners:
ENSAOWP00000013048
annotation not available
 
      0.869
CTNNB1
Catenin beta 1.
    
 0.795
ENSAOWP00000008279
annotation not available
    
 0.635
ENSAOWP00000008400
annotation not available
    
 0.635
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
 
 
 0.622
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.617
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.617
JUP
Junction plakoglobin.
    
 0.614
PTPRE
Protein tyrosine phosphatase receptor type E.
 
  
   0.607
PTPRK
Protein tyrosine phosphatase receptor type K.
 
      0.603
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.