STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCTD18Potassium channel tetramerization domain containing 18. (432 aa)    
Predicted Functional Partners:
TFAP2C
Transcription factor AP-2 gamma.
    
 0.559
TFAP2D
Transcription factor AP-2 delta.
    
 0.559
TFAP2B
Transcription factor AP-2 beta.
    
 0.559
TFAP2E
Transcription factor AP-2 epsilon.
    
 0.559
TFAP2A
Transcription factor AP-2 alpha.
    
 0.559
KIAA1958
KIAA1958.
    
 0.559
ENSAOWP00000019677
annotation not available
    
 0.536
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 0.522
CUL1
Cullin 1.
    
 0.500
CACUL1
CDK2 associated cullin domain 1.
    
 0.500
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.