STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000001473annotation not available (135 aa)    
Predicted Functional Partners:
PLAG1
PLAG1 zinc finger.
      
 0.499
NOTCH1
Notch receptor 1.
    
 
 0.478
TRHR
Thyrotropin releasing hormone receptor.
      
 0.457
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
      
 0.434
PENK
Proenkephalin.
      
 0.426
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
      
 0.424
GGA1
Golgi associated, gamma adaptin ear containing, ARF binding protein 1.
      
 0.422
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
      
 0.422
LYN
LYN proto-oncogene, Src family tyrosine kinase.
      
 0.402
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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