STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSTF1Cleavage stimulation factor subunit 1. (537 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.999
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.999
CPSF2
Cleavage and polyadenylation specific factor 2.
   
 0.995
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.967
ENSAOWP00000010351
annotation not available
   
 0.955
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.955
ZC3H3
Zinc finger CCCH-type containing 3.
   
 0.953
YTHDC2
YTH domain containing 2.
   
 0.933
YTHDC1
YTH domain containing 1.
    
 0.928
ZC3H4
Zinc finger CCCH-type containing 4.
   
 0.918
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.