STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCB11ATP binding cassette subfamily B member 11. (485 aa)    
Predicted Functional Partners:
ENSAOWP00000001536
annotation not available
 
     0.888
ACACB
acetyl-CoA carboxylase beta.
   
 0.675
ACACA
acetyl-CoA carboxylase alpha.
   
 0.675
KATNAL2
Katanin catalytic subunit A1 like 2.
  
 0.653
HIP1
Huntingtin interacting protein 1.
    
 0.652
HIP1R
Huntingtin interacting protein 1 related.
    
 0.652
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
   
 0.651
PMPCB
Peptidase, mitochondrial processing beta subunit.
   
 0.631
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
   
 0.631
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
     
 0.622
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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