STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCEA2Transcription elongation factor A2. (298 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.969
GTF2B
General transcription factor IIB.
   
 0.955
POLR2E
RNA polymerase II subunit E.
   
 0.951
POLR2C
RNA polymerase II subunit C.
   
 0.948
POLR2B
RNA polymerase II subunit B.
   
 0.946
POLR2D
RNA polymerase II subunit D.
   
 0.946
POLR2F
RNA polymerase II subunit F.
   
 0.945
ENSAOWP00000026026
annotation not available
   
 0.945
POLR2I
RNA polymerase II subunit I.
   
 0.945
ENSAOWP00000023940
annotation not available
  
 0.944
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.