STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000001607annotation not available (1001 aa)    
Predicted Functional Partners:
HERC4
HECT and RLD domain containing E3 ubiquitin protein ligase 4.
  
  
 
0.762
ENSAOWP00000008243
annotation not available
   
 0.745
TRIP12
Thyroid hormone receptor interactor 12.
     
0.718
TSC2
TSC complex subunit 2.
    
 0.708
ENSAOWP00000020798
annotation not available
    
  0.702
TP73
Tumor protein p73.
    
 0.670
TP63
Tumor protein p63.
    
 0.670
OASL
2'-5'-oligoadenylate synthetase like.
   
 0.655
TSC1
TSC complex subunit 1.
    
 0.644
CTNNB1
Catenin beta 1.
    
 0.642
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.