STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATXN1LAtaxin 1 like. (561 aa)    
Predicted Functional Partners:
ATXN1
Ataxin 1.
    
0.877
RBPJ
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.873
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
    
 0.861
KAT7
Lysine acetyltransferase 7.
    
 0.849
PUM1
Pumilio RNA binding family member 1.
     
 0.756
PUM2
Pumilio RNA binding family member 2.
     
 0.756
KAT6A
Lysine acetyltransferase 6A.
    
 0.739
KAT6B
Lysine acetyltransferase 6B.
    
 0.739
BBX
BBX high mobility group box domain containing.
    
 
 0.696
IST1
IST1 factor associated with ESCRT-III.
    
 0.665
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.