STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SOX18SRY-box transcription factor 18. (380 aa)    
Predicted Functional Partners:
LEF1
Lymphoid enhancer binding factor 1.
    
 0.876
TCF7
Transcription factor 7.
    
 0.860
CTNNB1
Catenin beta 1.
    
 0.806
TCF7L1
Transcription factor 7 like 1.
    
 0.805
TCF7L2
Transcription factor 7 like 2.
    
 0.805
ENSAOWP00000001011
annotation not available
    
 0.790
ENSAOWP00000006278
annotation not available
    
 0.726
JUP
Junction plakoglobin.
    
 0.681
GATA6
GATA binding protein 6.
   
 0.657
SOX3
SRY-box transcription factor 3.
     
0.528
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.