STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARRDC4Arrestin domain containing 4. (322 aa)    
Predicted Functional Partners:
TXN
Thioredoxin.
    
 0.822
TXN2
Thioredoxin 2.
    
 0.741
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.675
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.675
NME8
NME/NM23 family member 8.
    
 0.671
ENSAOWP00000000690
annotation not available
    
 0.661
ENSAOWP00000002839
annotation not available
    
 0.593
ENSAOWP00000012138
annotation not available
    
 0.593
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
    
 0.554
PDIA4
Protein disulfide isomerase family A member 4.
    
 0.510
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.