STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMA1Laminin subunit alpha 1. (2990 aa)    
Predicted Functional Partners:
DAG1
Dystroglycan 1.
    
 0.958
ITGA3
Integrin subunit alpha 3.
    
 0.916
ITGB1
Integrin subunit beta 1.
    
 0.914
ITGAV
Integrin subunit alpha V.
    
 0.913
ITGA4
Integrin subunit alpha 4.
    
 0.912
ENSAOWP00000011490
annotation not available
    
 0.905
ITGA8
Integrin subunit alpha 8.
    
 0.903
ITGA1
Integrin subunit alpha 1.
    
 0.903
ITGA2
Integrin subunit alpha 2.
    
 0.903
SV2B
Synaptic vesicle glycoprotein 2B.
    
 0.898
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.