STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000001815annotation not available (106 aa)    
Predicted Functional Partners:
LPL
Lipoprotein lipase.
     
 0.798
VLDLR
Very low density lipoprotein receptor.
     
 0.773
APOB
Apolipoprotein B.
   
 
 0.729
ENSAOWP00000021255
annotation not available
  
 
 0.697
LRP8
LDL receptor related protein 8.
     
 0.612
LDLR
Low density lipoprotein receptor.
     
 0.612
ENSAOWP00000016148
annotation not available
  
 
 0.607
ENSAOWP00000021233
annotation not available
  
 
 0.573
ENSAOWP00000003304
annotation not available
  
     0.457
ENSAOWP00000021852
annotation not available
  
     0.456
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.