STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPOR3RIPOR family member 3. (869 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.969
FREM1
FRAS1 related extracellular matrix 1.
    
 0.757
ENSAOWP00000001472
annotation not available
    
 0.734
ENSAOWP00000001302
annotation not available
   
 0.669
GLE1
GLE1 RNA export mediator.
    
 0.648
ASF1A
Anti-silencing function 1A histone chaperone.
    
 0.633
RPS28
Ribosomal protein S28.
   
  0.620
RPS21
Ribosomal protein S21.
   
  0.609
ENSAOWP00000004428
annotation not available
   
  0.596
ENSAOWP00000005894
annotation not available
   
  0.596
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.