STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEBPBCCAAT enhancer binding protein beta. (326 aa)    
Predicted Functional Partners:
ATF4
Activating transcription factor 4.
   
 0.975
ENSAOWP00000011102
annotation not available
    
 0.954
CEBPA
CCAAT enhancer binding protein alpha.
   
0.916
CEBPG
CCAAT enhancer binding protein gamma.
    
0.892
MYB
MYB proto-oncogene, transcription factor.
    
 0.884
EP300
E1A binding protein p300.
    
 0.869
MAPK13
Mitogen-activated protein kinase 13.
    
 0.856
MAPK12
Mitogen-activated protein kinase 12.
    
 0.856
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.856
ATF3
Activating transcription factor 3.
   
 0.841
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.