STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS28VPS28 subunit of ESCRT-I. (192 aa)    
Predicted Functional Partners:
TSG101
Tumor susceptibility 101.
   
 0.999
UEVLD
UEV and lactate/malate dehyrogenase domains.
   
 0.997
VPS37B
VPS37B subunit of ESCRT-I.
    
 0.995
VPS36
Vacuolar protein sorting 36 homolog.
    
 0.994
MVB12A
Multivesicular body subunit 12A.
   
 0.994
VPS25
Vacuolar protein sorting 25 homolog.
   
 0.991
MVB12B
Multivesicular body subunit 12B.
   
 0.990
VPS37A
VPS37A subunit of ESCRT-I.
   
 0.979
VPS37C
VPS37C subunit of ESCRT-I.
    
 0.972
CHMP6
Charged multivesicular body protein 6.
   
 0.961
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.