STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNTB1Syntrophin beta 1. (441 aa)    
Predicted Functional Partners:
ENSAOWP00000016433
annotation not available
    
 0.924
DAG1
Dystroglycan 1.
    
 0.836
SNTA1
Syntrophin alpha 1.
  
 
0.805
ENSAOWP00000007636
annotation not available
    
 0.786
ENSAOWP00000007657
annotation not available
    
 0.786
ENSAOWP00000011052
annotation not available
    
 0.786
SGCG
Sarcoglycan gamma.
     
 0.758
SGCB
Sarcoglycan beta.
     
 0.752
SSPN
Sarcospan.
     
 0.748
DRP2
Dystrophin related protein 2.
    
 0.705
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.