STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD42Ankyrin repeat domain 42. (515 aa)    
Predicted Functional Partners:
IQUB
IQ motif and ubiquitin domain containing.
  
  0.732
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.624
IFT88
Intraflagellar transport 88.
  
 0.621
MARS1
methionyl-tRNA synthetase 1.
   
 0.601
IFT81
Intraflagellar transport 81.
    
 0.596
IFT57
Intraflagellar transport 57.
   
 0.591
IFT52
Intraflagellar transport 52.
    
 0.589
SGTB
Small glutamine rich tetratricopeptide repeat containing beta.
   
 0.589
PPP6C
Protein phosphatase 6 catalytic subunit.
   
 0.585
IFT22
Intraflagellar transport 22.
    
 0.579
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.