STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNA1Cyclin A1. (405 aa)    
Predicted Functional Partners:
CDC6
Cell division cycle 6.
   
 0.992
CDK1
Cyclin dependent kinase 1.
   
 0.981
CDK2
Cyclin dependent kinase 2.
   
 0.974
CDK3
Cyclin dependent kinase 3.
   
 0.974
E2F1
E2F transcription factor 1.
   
 0.970
SKP2
S-phase kinase associated protein 2.
   
 0.967
RB1
RB transcriptional corepressor 1.
   
 0.967
CCNE1
Cyclin E1.
   
0.963
CDC20B
Cell division cycle 20B.
   
 0.960
CDC20
Cell division cycle 20.
   
 0.960
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.