STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000001981annotation not available (181 aa)    
Predicted Functional Partners:
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
  0.825
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
  0.807
ENSAOWP00000015076
annotation not available
   
 
  0.775
LSM10
LSM10, U7 small nuclear RNA associated.
   
 
 0.756
SNRPG
Small nuclear ribonucleoprotein polypeptide G.
   
 
  0.748
CLNS1A
Chloride nucleotide-sensitive channel 1A.
   
 
  0.707
CHTOP
Chromatin target of PRMT1.
   
   0.601
MAGOH
Mago homolog, exon junction complex subunit.
   
   0.525
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
   0.463
APEX1
Apurinic/apyrimidinic endodeoxyribonuclease 1.
   
 
  0.431
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.