STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM126ATransmembrane protein 126A. (215 aa)    
Predicted Functional Partners:
NDUFAF1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 
 0.736
ENSAOWP00000001159
annotation not available
     
 0.647
ACAD9
acyl-CoA dehydrogenase family member 9.
     
 0.647
ENSAOWP00000020562
annotation not available
     
 0.625
TMEM109
Transmembrane protein 109.
      
 0.598
TMEM41A
Transmembrane protein 41A.
      
 0.591
APOO
Apolipoprotein O.
   
   0.552
NDUFB6
NADH:ubiquinone oxidoreductase subunit B6.
   
 
 0.540
SSBP1
Single stranded DNA binding protein 1.
   
 
 0.534
CCDC58
Coiled-coil domain containing 58.
   
    0.529
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.