Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VTI1BVesicle transport through interaction with t-SNAREs 1B. (232 aa)    
Predicted Functional Partners:
VAMP4
Vesicle associated membrane protein 4.
   
 0.999
STX8
Syntaxin 8.
   
 0.999
STX7
Syntaxin 7.
   
 0.997
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
   
0.997
ENSAOWP00000001181
annotation not available
   
 0.996
STX6
Syntaxin 6.
   
 0.996
STX12
Syntaxin 12.
   
 0.995
YKT6
YKT6 v-SNARE homolog.
    
 0.990
CLINT1
Clathrin interactor 1.
    
 
 0.987
VAMP7
Vesicle associated membrane protein 7.
    
 0.987
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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