STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFRP1ADP ribosylation factor related protein 1. (215 aa)    
Predicted Functional Partners:
ENSAOWP00000000710
annotation not available
   
 0.897
COG6
Component of oligomeric golgi complex 6.
    
 0.855
ENSAOWP00000006841
annotation not available
   
 
 0.844
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.843
ENSAOWP00000009529
annotation not available
    
 0.816
RAB41
RAB41, member RAS oncogene family.
    
 0.816
VPS53
VPS53 subunit of GARP complex.
     
 0.776
ENSAOWP00000001181
annotation not available
    
 0.771
ARL1
ADP ribosylation factor like GTPase 1.
    
0.765
ENSAOWP00000000295
annotation not available
    
 0.765
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.