STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000002705annotation not available (280 aa)    
Predicted Functional Partners:
CCNH
Cyclin H.
    
 0.984
MNAT1
MNAT1 component of CDK activating kinase.
   
 0.983
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.982
ERCC2
ERCC excision repair 2, TFIIH core complex helicase subunit.
    
 0.982
GTF2H1
General transcription factor IIH subunit 1.
   
 0.981
GTF2H3
General transcription factor IIH subunit 3.
   
 0.980
GTF2H5
General transcription factor IIH subunit 5.
    
 0.978
POLR2A
RNA polymerase II subunit A.
    
 0.972
ENSAOWP00000012626
annotation not available
   
 0.959
GTF2E2
General transcription factor IIE subunit 2.
   
 0.940
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.