Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GFI1Growth factor independent 1 transcriptional repressor. (135 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
    
 0.912
RCOR1
REST corepressor 1.
    
 0.838
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
   
 0.639
RCOR3
REST corepressor 3.
    
 0.598
CEBPA
CCAAT enhancer binding protein alpha.
    
 0.575
MYB
MYB proto-oncogene, transcription factor.
   
 0.568
EHMT1
Euchromatic histone lysine methyltransferase 1.
   
 0.554
NME8
NME/NM23 family member 8.
    
 0.545
ENSAOWP00000024886
annotation not available
    
 0.536
SPI1
Spi-1 proto-oncogene.
    
 0.536
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.