STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A1Solute carrier family 30 member 1. (513 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 member 6.
    
 
 0.603
SLC30A9
Solute carrier family 30 member 9.
  
 
 0.594
SLC39A13
Solute carrier family 39 member 13.
   
 0.594
ENSAOWP00000017747
annotation not available
  
 0.565
SLC39A12
Solute carrier family 39 member 12.
   
 0.554
SLC39A9
Solute carrier family 39 member 9.
   
 
 0.509
SLC39A6
Solute carrier family 39 member 6.
   
 0.504
SLC39A11
Solute carrier family 39 member 11.
   
 0.494
GOLT1B
Golgi transport 1B.
     
 0.489
SLC31A1
Solute carrier family 31 member 1.
      
 0.485
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.