STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPSB3splA/ryanodine receptor domain and SOCS box containing 3. (355 aa)    
Predicted Functional Partners:
ENSAOWP00000023596
annotation not available
    
 0.874
CUL5
Cullin 5.
    
 0.807
ENSAOWP00000004670
annotation not available
    
 0.747
ENSAOWP00000002069
annotation not available
    
 
 0.696
ENSAOWP00000022428
annotation not available
    
 
 0.696
RNF7
Ring finger protein 7.
    
 0.695
CUL1
Cullin 1.
    
 0.629
CACUL1
CDK2 associated cullin domain 1.
    
 0.629
CUL3
Cullin 3.
    
 0.629
DCUN1D3
Defective in cullin neddylation 1 domain containing 3.
    
  0.611
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.