STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COPACoatomer protein complex subunit alpha. (1224 aa)    
Predicted Functional Partners:
COPE
Coatomer protein complex subunit epsilon.
   
 0.999
COPB2
Coatomer protein complex subunit beta 2.
   
0.999
ARCN1
Archain 1.
   
 0.998
COPB1
Coatomer protein complex subunit beta 1.
   
 0.998
COPG2
Coatomer protein complex subunit gamma 2.
   
 0.991
COPG1
Coatomer protein complex subunit gamma 1.
   
 0.991
COPZ2
Coatomer protein complex subunit zeta 2.
   
 0.965
COPZ1
Coatomer protein complex subunit zeta 1.
   
 0.965
PRR15L
Proline rich 15 like.
   
 0.958
ZW10
Zw10 kinetochore protein.
    
 0.931
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.