STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRXN1Sulfiredoxin 1. (156 aa)    
Predicted Functional Partners:
PRDX1
Peroxiredoxin 1.
   
 0.956
PRDX4
Peroxiredoxin 4.
   
 0.922
PRDX3
Peroxiredoxin 3.
   
 0.922
PRDX6
Peroxiredoxin 6.
   
 0.904
DENND10
DENN domain containing 10.
   
 0.901
TXN
Thioredoxin.
   
 
 0.636
NFE2L2
Nuclear factor, erythroid 2 like 2.
     
 0.537
GSR
Glutathione-disulfide reductase.
   
  
 0.528
CAT
Catalase.
   
  
 0.518
GCLC
Glutamate-cysteine ligase catalytic subunit.
   
  
 0.492
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.