STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CALD1Caldesmon 1. (549 aa)    
Predicted Functional Partners:
MAPK7
Mitogen-activated protein kinase 7.
    
 0.813
MAPK1
Mitogen-activated protein kinase 1.
    
 0.813
CALML4
Calmodulin like 4.
    
 0.759
MYH11
Myosin heavy chain 11.
   
 0.678
LMOD1
Leiomodin 1.
    
 0.678
MYH10
Myosin heavy chain 10.
   
 0.678
MYH9
Myosin heavy chain 9.
   
 0.678
MAPK14
Mitogen-activated protein kinase 14.
    
 0.638
MAPK13
Mitogen-activated protein kinase 13.
    
 0.638
MAPK11
Mitogen-activated protein kinase 11.
    
 0.638
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.