STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN3TatD DNase domain containing 3. (255 aa)    
Predicted Functional Partners:
UROD
Uroporphyrinogen decarboxylase.
    
  0.525
ENDOV
Endonuclease V.
    
  0.525
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.463
KATNAL2
Katanin catalytic subunit A1 like 2.
     
 0.446
MBLAC1
Metallo-beta-lactamase domain containing 1.
      
 0.422
ENSAOWP00000005701
annotation not available
      
 0.407
OTOL1
Otolin 1.
      
 0.407
RPS6KC1
Ribosomal protein S6 kinase C1.
      
 0.406
ANGEL2
Angel homolog 2.
      
 0.402
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.400
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.