STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO3LIM domain only 3. (145 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.900
LDB2
LIM domain binding 2.
    
 0.900
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor.
    
 0.809
GATA3
GATA binding protein 3.
    
 0.725
GATA2
GATA binding protein 2.
    
 0.718
TCF12
Transcription factor 12.
    
 0.697
TCF4
Transcription factor 4.
    
 0.697
TCF3
Transcription factor 3.
    
 0.697
CBFB
Core-binding factor subunit beta.
    
  0.645
GATA5
GATA binding protein 5.
    
 0.622
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.