STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000003587annotation not available (647 aa)    
Predicted Functional Partners:
CARD11
Caspase recruitment domain family member 11.
    
 0.926
CARD9
Caspase recruitment domain family member 9.
    
 0.903
TRAF6
TNF receptor associated factor 6.
    
 0.892
MAPK13
Mitogen-activated protein kinase 13.
    
  0.864
MAPK11
Mitogen-activated protein kinase 11.
    
  0.864
MAPK12
Mitogen-activated protein kinase 12.
    
  0.864
MAPK14
Mitogen-activated protein kinase 14.
    
  0.861
CASP8
Caspase 8.
   
 0.860
ENSAOWP00000000487
annotation not available
   
 0.860
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.857
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.