STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APBA1Amyloid beta precursor protein binding family A member 1. (714 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.999
STXBP1
Syntaxin binding protein 1.
    
 0.972
ENSAOWP00000013275
annotation not available
   
 
 0.933
ENSAOWP00000013678
annotation not available
   
 
 0.933
MPP1
Membrane palmitoylated protein 1.
   
 0.877
STXBP3
Syntaxin binding protein 3.
    
 0.837
MPP6
Membrane palmitoylated protein 6.
    
 0.827
MPP2
Membrane palmitoylated protein 2.
    
 0.827
ENSAOWP00000007447
annotation not available
    
 0.819
ENSAOWP00000015235
annotation not available
    
 0.819
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.