STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HDDC2HD domain containing 2. (215 aa)    
Predicted Functional Partners:
NT5E
5'-nucleotidase ecto.
    
 0.882
EPHX2
Epoxide hydrolase 2.
    
 0.851
TK1
Thymidine kinase 1.
    
  0.840
ENSAOWP00000003505
annotation not available
  
 
  0.824
PNP
Purine nucleoside phosphorylase.
  
 
  0.824
NUDT12
Nudix hydrolase 12.
    
  0.809
NUDT13
Nudix hydrolase 13.
    
  0.804
SMUG1
Single-strand-selective monofunctional uracil-DNA glycosylase 1.
  
 
  0.800
ENSAOWP00000022845
annotation not available
  
 
  0.800
DTYMK
Deoxythymidylate kinase.
  
 
  0.767
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.