STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RABGAP1RAB GTPase activating protein 1. (1069 aa)    
Predicted Functional Partners:
ENSAOWP00000009529
annotation not available
    
 0.675
RAB41
RAB41, member RAS oncogene family.
    
 0.675
ENSAOWP00000020733
annotation not available
   
  0.666
RAB34
RAB34, member RAS oncogene family.
    
 0.501
RAB36
RAB36, member RAS oncogene family.
    
 0.501
RAB1A
RAB1A, member RAS oncogene family.
    
 0.493
RAB19
RAB19, member RAS oncogene family.
    
 0.492
RAB43
RAB43, member RAS oncogene family.
    
 0.492
RAB22A
RAB22A, member RAS oncogene family.
    
 0.479
RABL6
RAB, member RAS oncogene family like 6.
    
 0.478
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.