STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOWP00000004444annotation not available (1975 aa)    
Predicted Functional Partners:
SCN2B
Sodium voltage-gated channel beta subunit 2.
   
 0.932
SCN1B
Sodium voltage-gated channel beta subunit 1.
    
 0.870
SCN3B
Sodium voltage-gated channel beta subunit 3.
    
 0.855
SCN4A
Sodium voltage-gated channel alpha subunit 4.
  
 
0.837
SCN8A
Sodium voltage-gated channel alpha subunit 8.
  
 
0.767
WDR35
WD repeat domain 35.
    
 0.751
IFT122
Intraflagellar transport 122.
   
 0.745
CACNG1
Calcium voltage-gated channel auxiliary subunit gamma 1.
   
 0.743
ENSAOWP00000004400
annotation not available
  
  
 
0.742
WDR19
WD repeat domain 19.
    
 0.736
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.