STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN8Tetraspanin 8. (204 aa)    
Predicted Functional Partners:
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.701
ENSAOWP00000018930
annotation not available
    
 0.701
MST1R
Macrophage stimulating 1 receptor.
    
  0.696
ITGA4
Integrin subunit alpha 4.
    
 0.689
PTPRC
Protein tyrosine phosphatase receptor type C.
    
 0.612
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.590
USH1C
USH1 protein network component harmonin.
   
 0.499
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.489
ILDR2
Immunoglobulin like domain containing receptor 2.
    
 
 0.465
PDGFB
Platelet derived growth factor subunit B.
    
  0.453
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.