STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L4BErythrocyte membrane protein band 4.1 like 4B. (645 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.978
PRKCZ
Protein kinase C zeta.
    
 0.856
PRKCI
Protein kinase C iota.
    
 0.856
ENSAOWP00000020505
annotation not available
     
 0.838
ENSAOWP00000020489
annotation not available
     
 0.773
MPP1
Membrane palmitoylated protein 1.
    
 0.602
MPP5
Membrane palmitoylated protein 5.
    
 0.485
MPP3
Membrane palmitoylated protein 3.
    
 0.463
MPP7
Membrane palmitoylated protein 7.
    
 0.463
MPP6
Membrane palmitoylated protein 6.
    
 0.458
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.