STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMNB2Lamin B2. (600 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
   
 0.883
CASP6
Caspase 6.
    
 0.865
ENSAOWP00000005512
annotation not available
  
  
0.817
LEMD3
LEM domain containing 3.
    
 0.764
SUN2
Sad1 and UNC84 domain containing 2.
    
 0.743
SUN1
Sad1 and UNC84 domain containing 1.
    
 0.722
ENSAOWP00000020928
annotation not available
   
 0.662
ENSAOWP00000019566
annotation not available
    
 0.651
ENSAOWP00000019567
annotation not available
    
 0.651
MAPRE1
Microtubule associated protein RP/EB family member 1.
    
 
 0.597
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.