STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KIAA1217KIAA1217. (1285 aa)    
Predicted Functional Partners:
FAM171A1
Family with sequence similarity 171 member A1.
    
 
 0.683
MAPRE1
Microtubule associated protein RP/EB family member 1.
    
 
 0.681
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
   0.667
TARBP1
TAR (HIV-1) RNA binding protein 1.
      
 0.616
LRPAP1
LDL receptor related protein associated protein 1.
      
 0.608
ARHGAP21
Rho GTPase activating protein 21.
    
 
 0.606
ZCCHC7
Zinc finger CCHC-type containing 7.
      
 0.604
ACAN
Aggrecan.
    
 
 0.601
RAG1
Recombination activating 1.
      
 0.596
FAM110B
Family with sequence similarity 110 member B.
      
 0.596
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.