STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CROTCarnitine O-octanoyltransferase. (622 aa)    
Predicted Functional Partners:
SCP2
Sterol carrier protein 2.
   
 
 0.815
PEX10
Peroxisomal biogenesis factor 10.
     
 0.671
ENSAOWP00000012040
annotation not available
     
 0.671
PEX13
Peroxisomal biogenesis factor 13.
     
 0.662
PEX12
Peroxisomal biogenesis factor 12.
     
 0.660
PEX5
Peroxisomal biogenesis factor 5.
     
 0.646
PEX5L
Peroxisomal biogenesis factor 5 like.
     
 0.646
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
   
  
 0.626
HSD17B4
Hydroxysteroid 17-beta dehydrogenase 4.
   
 
 0.622
HSDL2
Hydroxysteroid dehydrogenase like 2.
   
 
 0.599
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.